ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5c8wF1 - ECOD Domain | ECOD

ECOD/Domains/e5c8wF1

e5c8wF1

UID: 001726014

PDB

Range: F:151-268
PDB: 5C8W chain F(all domains)
UniProt: Q13237 (all domains)
Gene: PRKG2

Molecule: cGMP-dependent protein kinase 2

3D Structure

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Related Domains

Browse other domains in cNMP_binding →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilycNMP_binding(10.12.1.1)

Ligands

in contact, ≤ 4 Å

Malonic acidMLA
drugDrugBank DB02175
Cyclic GMPPCG
drugDrugBank DB02315
Sodium ion

Pfam Families

PF00027cNMP_binding

Cyclic nucleotide-binding domain

ClanCL0029Cupin

External Links

ECOD PDB View: 5C8W RCSB PDB: 5C8W PDBe: 5C8W UniProt: Q13237

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.