ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5d2rA2 - ECOD Domain | ECOD

ECOD/Domains/e5d2rA2

e5d2rA2

UID: 001726083

PDB

Range: A:23-267
PDB: 5D2R chain A(all domains)
UniProt: B5ZAD9 (all domains)
Gene: HPG27_353

Molecule: Conserved hypothetical secreted protein

3D Structure

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Related Domains

Browse other domains in Peptidase_M99 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupZn-dependent exopeptidases(2011.1)

TT-groupZn-dependent exopeptidases(2011.1.1)

FFamilyPeptidase_M99(2011.1.1.15)

Ligands

in contact, ≤ 4 Å

(2R,6R)-2-{[(R)-[(3R)-3-(acetylamino)-3-carboxypropyl](hydroxy)phosphoryl]methyl}-6-aminoheptanedioic acid56W
Iodide ionIOD
Zinc ionZN

Pfam Families

PF17033Peptidase_M99

Carboxypeptidase controlling helical cell shape catalytic

ClanCL0865ZnExoPePases

External Links

ECOD PDB View: 5D2R RCSB PDB: 5D2R PDBe: 5D2R UniProt: B5ZAD9

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.