ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5d3tA1 - ECOD Domain | ECOD

ECOD/Domains/e5d3tA1

e5d3tA1

UID: 001726092

PDB

Range: A:42-168
PDB: 5D3T chain A(all domains)
UniProt: O60885 (all domains)
Gene: BRD4

Molecule: Bromodomain-containing protein 4

3D Structure

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Related Domains

Browse other domains in Bromodomain →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupBromodomain(633.1)

TT-groupBromodomain(633.1.1)

FFamilyBromodomain(633.1.1.1)

Ligands

in contact, ≤ 4 Å

4-acetyl-N-(3-carbamoylbenzyl)-3-ethyl-N,5-dimethyl-1H-pyrrole-2-carboxamide56Y
Sodium ionNA
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Pfam Families

PF00439Bromodomain

Bromodomain

External Links

ECOD PDB View: 5D3T RCSB PDB: 5D3T PDBe: 5D3T UniProt: O60885

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.