ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5dkqA1 - ECOD Domain | ECOD

ECOD/Domains/e5dkqA1

e5dkqA1

UID: 001726094

PDB

Range: A:0-90
PDB: 5DKQ chain A(all domains)
UniProt: P02638 (all domains)
Gene: S100B

Molecule: Protein S100-B

3D Structure

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Related Domains

Browse other domains in EF-hand_1,S_100 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupEF-hand(108)

HH-groupEF-hand-related(108.1)

TT-groupEF-hand(108.1.1)

FFamilyEF-hand_1,S_100(108.1.1.2)

Ligands

in contact, ≤ 4 Å

2,2'-[pentane-1,5-diylbis(oxybenzene-4,1-diyl)]di-1,4,5,6-tetrahydropyrimidine5D0
Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00036EF-hand_1

EF hand domain

ClanCL0220EF_hand

S-100/ICaBP type calcium binding domain

ClanCL0220EF_hand

External Links

ECOD PDB View: 5DKQ RCSB PDB: 5DKQ PDBe: 5DKQ UniProt: P02638

Downloads

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