ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5es8B5 - ECOD Domain | ECOD

ECOD/Domains/e5es8B5

e5es8B5

UID: 001726262

PDB

Range: B:683-767
PDB: 5ES8 chain B(all domains)
UniProt: Q70LM7 (all domains)
Gene: lgrA

Molecule: Linear gramicidin synthetase subunit A

3D Structure

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Related Domains

Browse other domains in PP-binding →

Classification

AArchitecturealpha bundles(a.7)

XX-groupACP-like(132)

HH-groupAcyl-carrier protein (ACP)(132.1)

TT-groupAcyl-carrier protein (ACP)(132.1.1)

FFamilyPP-binding(132.1.1.1)

Ligands

in contact, ≤ 4 Å

[(3~{R})-4-[[3-[2-[[(2~{S})-2-azanyl-3-methyl-butanoyl]amino]ethylamino]-3-oxidanylidene-propyl]amino]-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-butyl] dihydrogen phosphate5S4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00550PP-binding

Phosphopantetheine attachment site

ClanCL0314PP-binding

External Links

ECOD PDB View: 5ES8 RCSB PDB: 5ES8 PDBe: 5ES8 UniProt: Q70LM7

Downloads

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