ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5f7kA1 - ECOD Domain | ECOD

ECOD/Domains/e5f7kA1

e5f7kA1

UID: 001726328

PDB

Range: A:32-460
PDB: 5F7K chain A(all domains)
UniProt: O52269 (all domains)
Gene: babA2

Molecule: Adhesin binding fucosylated histo-blood group antigen

3D Structure

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Related Domains

Browse other domains in SabA_adhesion →

Classification

AArchitecturealpha bundles(a.7)

XX-groupSabA N-terminal extracellular adhesion domain(3799)

HH-groupSabA N-terminal extracellular adhesion domain(3799.1)

TT-groupSabA N-terminal extracellular adhesion domain(3799.1.1)

FFamilySabA_adhesion(3799.1.1.1)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 2 additives (Phosphate ion, 1,2-ETHANEDIOL)

Phosphate ionPO4
DrugBank DB14523
1,2-ETHANEDIOLEDO

Pfam Families

PF18304SabA_adhesion

SabA N-terminal extracellular adhesion domain

External Links

ECOD PDB View: 5F7K RCSB PDB: 5F7K PDBe: 5F7K UniProt: O52269

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.