ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5flmA7 - ECOD Domain | ECOD

ECOD/Domains/e5flmA7

e5flmA7

UID: 001726441

PDB

Range: A:351-388,A:450-533
PDB: 5FLM chain A(all domains)
UniProt: G3MZY8 (all domains)
Gene: POLR2A

Molecule: DNA-DIRECTED RNA POLYMERASE

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb1_2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupdouble psi(1.1.2)

FFamilyRNA_pol_Rpb1_2(1.1.2.2)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00623RNA_pol_Rpb1_2

RNA polymerase Rpb1, domain 2

External Links

ECOD PDB View: 5FLM RCSB PDB: 5FLM PDBe: 5FLM UniProt: G3MZY8

Downloads

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