ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5flmB2 - ECOD Domain | ECOD

ECOD/Domains/e5flmB2

e5flmB2

UID: 001726445

PDB

Range: B:16-67,B:87-200,B:392-528
PDB: 5FLM chain B(all domains)
UniProt: A5PJW8 (all domains)
Gene: POLR2B

Molecule: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupN-terminal domain in beta subunit of DNA dependent RNA-polymerase(4010)

HH-groupN-terminal domain in beta subunit of DNA dependent RNA-polymerase(4010.1)

TT-groupN-terminal domain in beta subunit of DNA dependent RNA-polymerase(4010.1.1)

FFamilyRNA_pol_Rpb2_1,RNA_pol_Rpb2_3(4010.1.1.2)

Pfam Families

PF04563RNA_pol_Rpb2_1

RNA polymerase beta subunit

PF04565RNA_pol_Rpb2_3

RNA polymerase Rpb2, domain 3

External Links

ECOD PDB View: 5FLM RCSB PDB: 5FLM PDBe: 5FLM UniProt: A5PJW8

Downloads

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