ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4xr5B3 - ECOD Domain | ECOD

ECOD/Domains/e4xr5B3

e4xr5B3

UID: 001731308

PDB

Range: B:336-440
PDB: 4XR5 chain B(all domains)
UniProt: Q7CP66 (all domains)
Gene: deoA

Molecule: Thymidine phosphorylase

3D Structure

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Related Domains

Browse other domains in PYNP_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325)

HH-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325.1)

TT-groupPyrimidine nucleoside phosphorylase C-terminal domain(325.1.3)

FFamilyPYNP_C(325.1.3.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Triethylene glycol)

Triethylene glycolPGE
DrugBank DB02327

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Pyrimidine nucleoside phosphorylase C-terminal domain

ClanCL0105Hybrid

External Links

ECOD PDB View: 4XR5 RCSB PDB: 4XR5 PDBe: 4XR5 UniProt: Q7CP66

Downloads

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