ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4xtmA1 - ECOD Domain | ECOD

ECOD/Domains/e4xtmA1

e4xtmA1

UID: 001731364

PDB

Range: A:1-233
PDB: 4XTM chain A(all domains)
UniProt: P81371 (all domains)

Molecule: Seed lectin

3D Structure

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Related Domains

Browse other domains in Lectin_legB →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyLectin_legB(10.1.1.2)

Ligands

in contact, ≤ 4 Å

alpha-N-Acetyl-D-galactosamineA2G
drugDrugBank DB03567
Calcium ionCA
metal
MANGANESE (II) ION

Pfam Families

PF00139Lectin_legB

Legume lectin domain

ClanCL0004Concanavalin

External Links

ECOD PDB View: 4XTM RCSB PDB: 4XTM PDBe: 4XTM UniProt: P81371

Downloads

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metal

+ 3 additives (Citric acid, Glycerin, Sulfate ion)

Citric acidCIT
DrugBank DB04272
GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.