ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4xz3C2 - ECOD Domain | ECOD

ECOD/Domains/e4xz3C2

e4xz3C2

UID: 001731418

PDB

Range: C:131-295
PDB: 4XZ3 chain C(all domains)
UniProt: B1L3C9 (all domains)
Gene: Kcr_0198

Molecule: Acyl-CoA synthetase (NDP forming)

3D Structure

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Related Domains

Browse other domains in Succ_CoA_lig →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupSuccinyl-CoA synthetase domains(2007.3)

TT-groupSuccinyl-CoA synthetase domains(2007.3.1)

FFamilySucc_CoA_lig(2007.3.1.3)

Ligands

in contact, ≤ 4 Å

Adenosine-5'-[Beta, Gamma-Methylene]TriphosphateACP
drugDrugBank DB03909
Coenzyme ACOA
drugDrugBank DB01992

Pfam Families

PF13607Succ_CoA_lig

Succinyl-CoA ligase like flavodoxin domain

ClanCL0506Succ_CoA_synth

External Links

ECOD PDB View: 4XZ3 RCSB PDB: 4XZ3 PDBe: 4XZ3 UniProt: B1L3C9

Downloads

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Magnesium ionMG

metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.