ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5dkpm1 - ECOD Domain | ECOD

ECOD/Domains/e5dkpm1

e5dkpm1

UID: 001731743

PDB

Range: m:7-196
PDB: 5DKP chain m(all domains)
UniProt: Q9JZ38 (all domains)
Gene: clpP

Molecule: ATP-dependent Clp protease proteolytic subunit

3D Structure

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Related Domains

Browse other domains in CLP_protease →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupClpP/crotonase(2486)

HH-groupClpP/crotonase(2486.1)

TT-groupClpP/crotonase(2486.1.1)

FFamilyCLP_protease(2486.1.1.2)

Ligands

in contact, ≤ 4 Å

Potassium ionK
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00574CLP_protease

Clp protease

ClanCL0127ClpP_crotonase

External Links

ECOD PDB View: 5DKP RCSB PDB: 5DKP PDBe: 5DKP UniProt: Q9JZ38

Downloads

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