ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fc5A1 - ECOD Domain | ECOD

ECOD/Domains/e5fc5A1

e5fc5A1

UID: 001731862

PDB

Range: A:23-445
PDB: 5FC5 chain A(all domains)
UniProt: P70158 (all domains)
Gene: Smpdl3a

Molecule: Acid sphingomyelinase-like phosphodiesterase 3a

3D Structure

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Related Domains

Browse other domains in Metallophos,ASMase_C →

Classification

AArchitecturea+b four layers(a.13)

XX-groupCarbon-nitrogen hydrolase-like(246)

HH-groupMetallo-dependent phosphatases(246.2)

TT-groupMetallo-dependent phosphatases(246.2.1)

FFamilyMetallophos,ASMase_C(246.2.1.5)

Ligands

in contact, ≤ 4 Å

N,N,N-Trimethyl-2-(phosphonooxy)ethanaminiumPC
drugDrugBank DB03945
Zinc ionZN
metal

+ 1 additive (Glycerin)

Pfam Families

PF00149Metallophos

Calcineurin-like phosphoesterase

ClanCL0163Calcineurin

PF19272ASMase_C

Acid sphingomyelin phosphodiesterase C-terminal region

External Links

ECOD PDB View: 5FC5 RCSB PDB: 5FC5 PDBe: 5FC5 UniProt: P70158

Downloads

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GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.