ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fp3B1 - ECOD Domain | ECOD

ECOD/Domains/e5fp3B1

e5fp3B1

UID: 001731891

PDB

Range: B:1559-1622
PDB: 5FP3 chain B(all domains)
UniProt: O15054 (all domains)
Gene: KDM6B

Molecule: HUMAN LYSINE-SPECIFIC DEMETHYLASE 6B, JMJD3

3D Structure

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Related Domains

Browse other domains in KDM6_GATAL →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupGlucocorticoid receptor-like(377)

HH-groupLIM domain-like(377.1)

TT-groupLIM domain-like(377.1.1)

FFamilyKDM6_GATAL(377.1.1.27)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF21326KDM6_GATAL

KDM6, GATA-like

ClanCL0839Tbcl_zf

External Links

ECOD PDB View: 5FP3 RCSB PDB: 5FP3 PDBe: 5FP3 UniProt: O15054

Downloads

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