ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5hm8E2 - ECOD Domain | ECOD

ECOD/Domains/e5hm8E2

e5hm8E2

UID: 001732324

PDB

Range: E:2-243,E:409-495
PDB: 5HM8 chain E(all domains)
UniProt: Q5CPH1 (all domains)
Gene: cgd3_80

Molecule: Adenosylhomocysteinase

3D Structure

Loading viewer...

Related Domains

Browse other domains in AdoHcyase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFormate/glycerate dehydrogenase catalytic domain-like(2003.1.11)

FFamilyAdoHcyase(2003.1.11.3)

Ligands

in contact, ≤ 4 Å

AdenosineADN
drugDrugBank DB00640
NadideNAD
drugDrugBank DB14128

+ 1 additive (Sulfate ion)

Pfam Families

PF05221AdoHcyase

S-adenosyl-L-homocysteine hydrolase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5HM8 RCSB PDB: 5HM8 PDBe: 5HM8 UniProt: Q5CPH1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.