ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5azbA1 - ECOD Domain | ECOD

ECOD/Domains/e5azbA1

e5azbA1

UID: 001734349

RepresentativePDB

Range: A:3-286
PDB: 5AZB chain A(all domains)
UniProt: P60955 (all domains)
Gene: lgt

Molecule: Prolipoprotein diacylglyceryl transferase

3D Structure

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Related Domains

Browse other domains in LGT →

Classification

AArchitecturealpha bundles(a.7)

XX-groupProlipoprotein diacylglyceryl transferase(1037)

HH-groupProlipoprotein diacylglyceryl transferase(1037.1)

TT-groupProlipoprotein diacylglyceryl transferase(1037.1.1)

FFamilyLGT(1037.1.1.1)

Ligands

in contact, ≤ 4 Å

Palmitic AcidPLM
drugDrugBank DB03796
(1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATEPGT

+ 1 additive (octyl beta-D-glucopyranoside)

Pfam Families

Prolipoprotein diacylglyceryl transferase

External Links

ECOD PDB View: 5AZB RCSB PDB: 5AZB PDBe: 5AZB UniProt: P60955

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

octyl beta-D-glucopyranosideBOG

Shown in the structure viewer. Drug annotations from DrugDomain.