ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ccvF3 - ECOD Domain | ECOD

ECOD/Domains/e5ccvF3

e5ccvF3

UID: 001734805

PDB

Range: F:263-453,F:476-700
PDB: 5CCV chain F(all domains)
UniProt: P27915 (all domains)

Molecule: RNA-directed RNA polymerase NS5

3D Structure

Loading viewer...

Related Domains

Browse other domains in Flavi_NS5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyFlavi_NS5(304.48.1.13)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00972Flavi_NS5

Flavivirus RNA-directed RNA polymerase, fingers and palm domains

ClanCL0027RdRP

External Links

ECOD PDB View: 5CCV RCSB PDB: 5CCV PDBe: 5CCV UniProt: P27915

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure