ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ccvH2 - ECOD Domain | ECOD

ECOD/Domains/e5ccvH2

e5ccvH2

UID: 001734810

PDB

Range: H:263-449,H:479-700
PDB: 5CCV chain H(all domains)
UniProt: P27915 (all domains)

Molecule: RNA-directed RNA polymerase NS5

3D Structure

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Related Domains

Browse other domains in Flavi_NS5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyFlavi_NS5(304.48.1.13)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00972Flavi_NS5

Flavivirus RNA-directed RNA polymerase, fingers and palm domains

ClanCL0027RdRP

External Links

ECOD PDB View: 5CCV RCSB PDB: 5CCV PDBe: 5CCV UniProt: P27915

Downloads

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