ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5comA1 - ECOD Domain | ECOD

ECOD/Domains/e5comA1

e5comA1

UID: 001734834

PDB

Range: A:13-183
PDB: 5COM chain A(all domains)
UniProt: Q187F5 (all domains)
Gene: CD630_18460

Molecule: Putative conjugative transposon protein Tn1549-like, CTn5-Orf2

3D Structure

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Related Domains

Browse other domains in DUF1706 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupYfiT-like putative metal-dependent hydrolases(620)

HH-groupYfiT-like putative metal-dependent hydrolases(620.1)

TT-groupYfiT-like putative metal-dependent hydrolases(620.1.1)

FFamilyDUF1706(620.1.1.3)

Ligands

in contact, ≤ 4 Å

D-tartaric acidTAR
drugDrugBank DB01694

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08020DUF1706

Protein of unknown function (DUF1706)

ClanCL0310DinB

External Links

ECOD PDB View: 5COM RCSB PDB: 5COM PDBe: 5COM UniProt: Q187F5

Downloads

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