ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5cqvB1 - ECOD Domain | ECOD

ECOD/Domains/e5cqvB1

e5cqvB1

UID: 001734839

PDB

Range: B:13-184
PDB: 5CQV chain B(all domains)
UniProt: Q8DWV2 (all domains)
Gene: SAG2111

Molecule: Uncharacterized protein

3D Structure

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Related Domains

Browse other domains in DUF1706 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupYfiT-like putative metal-dependent hydrolases(620)

HH-groupYfiT-like putative metal-dependent hydrolases(620.1)

TT-groupYfiT-like putative metal-dependent hydrolases(620.1.1)

FFamilyDUF1706(620.1.1.3)

Ligands

in contact, ≤ 4 Å

(4R)-2-METHYLPENTANE-2,4-DIOLMRD

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08020DUF1706

Protein of unknown function (DUF1706)

ClanCL0310DinB

External Links

ECOD PDB View: 5CQV RCSB PDB: 5CQV PDBe: 5CQV UniProt: Q8DWV2

Downloads

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