ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3qyfB2 - ECOD Domain | ECOD

ECOD/Domains/e3qyfB2

e3qyfB2

UID: 001735648

PDB

Range: B:-2-205
PDB: 3QYF chain B(all domains)
UniProt: Q97YD2 (all domains)
Gene: SSO1393

Molecule: CRISPR-ASSOCIATED PROTEIN

3D Structure

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Related Domains

Browse other domains in Cas_APE2256 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupCARF (CRISPR-associated Rossmann fold) domains(7592)

HH-groupCARF (CRISPR-associated Rossmann fold) domains(7592.1)

TT-groupCARF (CRISPR-associated Rossmann fold) domains(7592.1.1)

FFamilyCas_APE2256(7592.1.1.2)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09651Cas_APE2256

CRISPR-associated protein (Cas_APE2256)

ClanCL0236PDDEXK

External Links

ECOD PDB View: 3QYF RCSB PDB: 3QYF PDBe: 3QYF UniProt: Q97YD2

Downloads

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