ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4zdtB1 - ECOD Domain | ECOD

ECOD/Domains/e4zdtB1

e4zdtB1

UID: 001736235

RepresentativePDB

Range: B:349-417
PDB: 4ZDT chain B(all domains)
UniProt: Q9P6M0 (all domains)
Gene: slx4

Molecule: Structure-specific endonuclease subunit slx4

3D Structure

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Related Domains

Browse other domains in Slx4 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilySlx4(101.1.1.51)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Slx4 endonuclease

ClanCL0123HTH

External Links

ECOD PDB View: 4ZDT RCSB PDB: 4ZDT PDBe: 4ZDT UniProt: Q9P6M0

Downloads

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