ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4x8iC1 - ECOD Domain | ECOD

ECOD/Domains/e4x8iC1

e4x8iC1

UID: 001736352

PDB

Range: C:1-67,C:159-346
PDB: 4X8I chain C(all domains)
UniProt: Q8TZW4 (all domains)
Gene: PF1861

Molecule: Lysyl aminopeptidase

3D Structure

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Related Domains

Browse other domains in Peptidase_M42 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupZn-dependent exopeptidases(2011.1)

TT-groupZn-dependent exopeptidases(2011.1.1)

FFamilyPeptidase_M42(2011.1.1.11)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
COBALT (II) IONCO
metal
10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE 1,4,7-TRIACETIC ACIDDO3

Pfam Families

PF05343Peptidase_M42

M42 glutamyl aminopeptidase

ClanCL0865ZnExoPePases

External Links

ECOD PDB View: 4X8I RCSB PDB: 4X8I PDBe: 4X8I UniProt: Q8TZW4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Gadolinium atomGD

metal

Zinc ionZN

metal

Shown in the structure viewer. Drug annotations from DrugDomain.