ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5a8bC1 - ECOD Domain | ECOD

ECOD/Domains/e5a8bC1

e5a8bC1

UID: 001736503

PDB

Range: C:-6-370
PDB: 5A8B chain C(all domains)
UniProt: A0A140UHJ0 (all domains)

Molecule: PTAUREO1A LOV2 DOMAIN

3D Structure

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Related Domains

Browse other domains in PAS_9 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupsensor domains(223.1)

TT-groupsensor domains(223.1.1)

FFamilyPAS_9(223.1.1.25)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247
Chloride ionCL
within 5 Å only

+ 1 additive (Glycerin)

Pfam Families

PAS domain

ClanCL0183PAS_Fold

External Links

ECOD PDB View: 5A8B RCSB PDB: 5A8B PDBe: 5A8B UniProt: A0A140UHJ0

Downloads

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Glycerin

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.