ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4zdtD1 - ECOD Domain | ECOD

ECOD/Domains/e4zdtD1

e4zdtD1

UID: 001737456

PDB

Range: D:349-417
PDB: 4ZDT chain D(all domains)

Molecule: Structure-specific endonuclease subunit slx4

3D Structure

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Related Domains

Browse other domains in Slx4 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilySlx4(101.1.1.51)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Slx4 endonuclease

ClanCL0123HTH

External Links

ECOD PDB View: 4ZDT RCSB PDB: 4ZDT PDBe: 4ZDT

Downloads

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