ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hzoA1 - ECOD Domain | ECOD

ECOD/Domains/e5hzoA1

e5hzoA1

UID: 001738979

PDB

Range: A:4-235
PDB: 5HZO chain A(all domains)
UniProt: P42212 (all domains)
Gene: GFP

Molecule: Green fluorescent protein

3D Structure

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Related Domains

Browse other domains in GFP →

Classification

AArchitecturebeta barrels(a.1)

XX-groupGFP-like(271)

HH-groupGFP-like(271.1)

TT-groupGFP-like(271.1.1)

FFamilyGFP(271.1.1.1)

Ligands

in contact, ≤ 4 Å

Undecyl-Beta-D-MaltopyranosideUMQ
drugDrugBank DB02686within 5 Å only

+ 1 additive (D-Malic acid)

D-Malic acidMLT
DrugBank DB03499

Pfam Families

Green fluorescent protein

ClanCL0069GFP

External Links

ECOD PDB View: 5HZO RCSB PDB: 5HZO PDBe: 5HZO UniProt: P42212

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.