ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3lumA1 - ECOD Domain | ECOD

ECOD/Domains/e3lumA1

e3lumA1

UID: 000175304

RepresentativePDB

Range: A:61-322
PDB: 3LUM chain A(all domains)
UniProt: Q8TL28 (all domains)
Gene: MA_3214

Molecule: Ulilysin

3D Structure

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Related Domains

Browse other domains in Peptidase_M43 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M43(2498.1.1.27)

Ligands

in contact, ≤ 4 Å

ArginineARG
drugDrugBank DB00125
ValineVAL
drugDrugBank DB00161
Calcium ion

Pfam Families

PF05572Peptidase_M43

Pregnancy-associated plasma protein-A

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 3LUM RCSB PDB: 3LUM PDBe: 3LUM UniProt: Q8TL28

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Zinc ionZN

metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.