ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4lkvA2 - ECOD Domain | ECOD

ECOD/Domains/e4lkvA2

e4lkvA2

UID: 001756178

PDB

Range: A:4-206,A:298-315
PDB: 4LKV chain A(all domains)
UniProt: O67572 (all domains)
Gene: lpxK

Molecule: Tetraacyldisaccharide 4'-kinase

3D Structure

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Related Domains

Browse other domains in LpxK →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyLpxK(2004.1.1.91)

Ligands

in contact, ≤ 4 Å

2-deoxy-3-O-[(3R)-3-hydroxytetradecanoyl]-2-{[(3R)-3-hydroxytetradecanoyl]amino}-4-O-phosphono-beta-D-glucopyranoseLP4
(R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATELP5

+ 1 additive (HEPES)

Pfam Families

Tetraacyldisaccharide-1-P 4'-kinase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 4LKV RCSB PDB: 4LKV PDBe: 4LKV UniProt: O67572

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

HEPESEPE

DrugBank DB16872

Shown in the structure viewer. Drug annotations from DrugDomain.