ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3f2dA1 - ECOD Domain | ECOD

ECOD/Domains/e3f2dA1

e3f2dA1

UID: 001758975

PDB

Range: A:331-424,A:618-816
PDB: 3F2D chain A(all domains)
UniProt: Q5L0J3 (all domains)
Gene: polC

Molecule: GEOBACILLUS KAUSTOPHILUS DNA POLC

3D Structure

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Related Domains

Browse other domains in PHP →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPHP(2002.1.1.102)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal
Zinc ionZN
metal

+ 1 additive (Phosphate ion)

Phosphate ion

Pfam Families

PHP domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3F2D RCSB PDB: 3F2D PDBe: 3F2D UniProt: Q5L0J3

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.