ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4z7aA1 - ECOD Domain | ECOD

ECOD/Domains/e4z7aA1

e4z7aA1

UID: 001759164

PDB

Range: A:261-416
PDB: 4Z7A chain A(all domains)
UniProt: A5TZL1 (all domains)
Gene: lprQ

Molecule: Mycobacterium tuberculosis (3,3)L,D-Transpeptidase type 5

3D Structure

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Related Domains

Browse other domains in YkuD →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupL,D-transpeptidase catalytic domain-like(4091)

HH-groupL,D-transpeptidase catalytic domain-like(4091.1)

TT-groupL,D-transpeptidase catalytic domain-like(4091.1.1)

FFamilyYkuD(4091.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Triethylene glycol)

Triethylene glycolPGE
DrugBank DB02327

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

L,D-transpeptidase catalytic domain

ClanCL0508YkuD

External Links

ECOD PDB View: 4Z7A RCSB PDB: 4Z7A PDBe: 4Z7A UniProt: A5TZL1

Downloads

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