ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3glbD2 - ECOD Domain | ECOD

ECOD/Domains/e3glbD2

e3glbD2

UID: 001759256

PDB

Range: D:89-161,D:268-303
PDB: 3GLB chain D(all domains)
UniProt: P07774 (all domains)
Gene: catM

Molecule: HTH-type transcriptional regulator catM

3D Structure

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Related Domains

Browse other domains in LysR_substrate →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyLysR_substrate(7523.1.1.15)

Ligands

in contact, ≤ 4 Å

(2Z,4Z)-HEXA-2,4-DIENEDIOIC ACIDCCU

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03466LysR_substrate

LysR substrate binding domain

ClanCL0177PBP

External Links

ECOD PDB View: 3GLB RCSB PDB: 3GLB PDBe: 3GLB UniProt: P07774

Downloads

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