ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1dfaA3 - ECOD Domain | ECOD

ECOD/Domains/e1dfaA3

e1dfaA3

UID: 001759463

PDB

Range: A:181-253,A:281-298
PDB: 1DFA chain A(all domains)
UniProt: P17255 (all domains)
Gene: VMA1

Molecule: PI-SCEI ENDONUCLEASE

3D Structure

Loading viewer...

Related Domains

Browse other domains in Hom_end →

Classification

AArchitecturea+b two layers(a.11)

XX-groupHoming endonucleases-like(242)

HH-groupHoming endonucleases(242.1)

TT-groupHoming endonucleases(242.1.1)

FFamilyHom_end(242.1.1.3)

Pfam Families

PF05204Hom_end

Homing endonuclease

ClanCL0324Homing_endonuc

External Links

ECOD PDB View: 1DFA RCSB PDB: 1DFA PDBe: 1DFA UniProt: P17255

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure