ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4nktB1 - ECOD Domain | ECOD

ECOD/Domains/e4nktB1

e4nktB1

UID: 001759607

PDB

Range: B:164-377
PDB: 4NKT chain B(all domains)
UniProt: O13833 (all domains)
Gene: cid1

Molecule: Poly(A) RNA polymerase protein cid1

3D Structure

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Related Domains

Browse other domains in PAP_assoc →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupPAP/OAS1 substrate-binding domain(102.1.3)

FFamilyPAP_assoc(102.1.3.1)

Ligands

in contact, ≤ 4 Å

5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine2KH
Bromide ionBR
Magnesium ionMG

Pfam Families

PF03828PAP_assoc

Cid1 family poly A polymerase

External Links

ECOD PDB View: 4NKT RCSB PDB: 4NKT PDBe: 4NKT UniProt: O13833

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.