ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5a1sD1 - ECOD Domain | ECOD

ECOD/Domains/e5a1sD1

e5a1sD1

UID: 001759948

RepresentativePDB

Range: D:15-448
PDB: 5A1S chain D(all domains)
UniProt: A0A0L3VIR8 (all domains)

Molecule: CITRATE-SODIUM SYMPORTER

3D Structure

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Related Domains

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Classification

AArchitecturealpha complex topology(a.10)

XX-groupCation-proton antiporter(3236)

HH-groupSodium-dependent citrate symporter(3236.2)

TT-groupSodium-dependent citrate symporter(3236.2.1)

FFamily2HCT(3236.2.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Sodium ionNA
metal
UndecaneUND

+ 3 additives (2-(N-morpholino)ethanesulfonic acid, octyl beta-D-glucopyranoside, Citrate anion)

Pfam Families

2-hydroxycarboxylate transporter family

ClanCL0064CPA_AT

External Links

ECOD PDB View: 5A1S RCSB PDB: 5A1S PDBe: 5A1S UniProt: A0A0L3VIR8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

2-(N-morpholino)ethanesulfonic acidMES

DrugBank DB03814

octyl beta-D-glucopyranosideBOG

Citrate anionFLC

Shown in the structure viewer. Drug annotations from DrugDomain.