ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hzlB1 - ECOD Domain | ECOD

ECOD/Domains/e5hzlB1

e5hzlB1

UID: 001759959

RepresentativePDB

Range: B:12-53
PDB: 5HZL chain B(all domains)
UniProt: Q8Y4J3 (all domains)
Gene: lmo2445

Molecule: Lmo2445 protein

3D Structure

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Related Domains

Browse other domains in Internalin_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupEF-hand(108)

HH-groupEF-hand-related(108.1)

TT-groupEF-hand(108.1.1)

FFamilyInternalin_N(108.1.1.24)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF12354Internalin_N

Bacterial adhesion/invasion protein N terminal

ClanCL0220EF_hand

External Links

ECOD PDB View: 5HZL RCSB PDB: 5HZL PDBe: 5HZL UniProt: Q8Y4J3

Downloads

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