ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3mdlB2 - ECOD Domain | ECOD

ECOD/Domains/e3mdlB2

e3mdlB2

UID: 001761251

PDB

Range: B:35-73
PDB: 3MDL chain B(all domains)
UniProt: Q05769 (all domains)
Gene: Ptgs2

Molecule: Prostaglandin G/H synthase 2

3D Structure

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Related Domains

Browse other domains in EGF →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupEGF-like(389)

HH-groupEGF-related(389.1)

TT-groupEGF/Laminin(389.1.1)

FFamilyEGF(389.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Pfam Families

EGF-like domain

ClanCL0001EGF

External Links

ECOD PDB View: 3MDL RCSB PDB: 3MDL PDBe: 3MDL UniProt: Q05769

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.