ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3u60E4 - ECOD Domain | ECOD

ECOD/Domains/e3u60E4

e3u60E4

UID: 001762092

PDB

Range: E:160-257
PDB: 3U60 chain E(all domains)
UniProt: P04526 (all domains)
Gene: 44

Molecule: DNA polymerase accessory protein 44

3D Structure

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Related Domains

Browse other domains in Gp44_lid →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHistone-like(148)

HH-groupHistone-related(148.1)

TT-groupAAA+ ATPase lid domain(148.1.3)

FFamilyGp44_lid(148.1.3.34)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Magnesium ionMG
metal
[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-tris(fluoranyl)beryllium

Pfam Families

PF21328Gp44_lid

Sliding-clamp-loader large subunit, AAA+ ATPase lid domain

ClanCL0671AAA_lid

External Links

ECOD PDB View: 3U60 RCSB PDB: 3U60 PDBe: 3U60 UniProt: P04526

Downloads

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within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.