ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ee3B1 - ECOD Domain | ECOD

ECOD/Domains/e5ee3B1

e5ee3B1

UID: 001763865

PDB

Range: B:14-303
PDB: 5EE3 chain B(all domains)
UniProt: Q6Z1J6 (all domains)
Gene: YCHF1

Molecule: Obg-like ATPase 1

3D Structure

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Related Domains

Browse other domains in MMR_HSR1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyMMR_HSR1(2004.1.1.73)

Ligands

in contact, ≤ 4 Å

Phosphoaminophosphonic acid-adenylate esterANP
Chloride ionCL
Magnesium ionMG

Pfam Families

PF01926MMR_HSR1

50S ribosome-binding GTPase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5EE3 RCSB PDB: 5EE3 PDBe: 5EE3 UniProt: Q6Z1J6

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.