ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5emmA1 - ECOD Domain | ECOD

ECOD/Domains/e5emmA1

e5emmA1

UID: 001763885

PDB

Range: A:294-465
PDB: 5EMM chain A(all domains)
UniProt: O14744 (all domains)
Gene: PRMT5

Molecule: Protein arginine N-methyltransferase 5

3D Structure

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Related Domains

Browse other domains in PRMT5 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyPRMT5(2003.1.5.47)

Ligands

in contact, ≤ 4 Å

SinefunginSFG
drugDrugBank DB01910
~{N}-[(2~{S})-3-(3,4-dihydro-1~{H}-isoquinolin-2-yl)-2-oxidanyl-propyl]-3-(oxan-4-ylamino)benzamide5QL

+ 1 additive (Glycerin)

Pfam Families

PRMT5 arginine-N-methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5EMM RCSB PDB: 5EMM PDBe: 5EMM UniProt: O14744

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Glycerin

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.