ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hg2D1 - ECOD Domain | ECOD

ECOD/Domains/e5hg2D1

e5hg2D1

UID: 001764039

PDB

Range: D:1-57
PDB: 5HG2 chain D(all domains)
UniProt: P19909 (all domains)
Gene: spg

Molecule: Immunoglobulin G-binding protein G

3D Structure

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Related Domains

Browse other domains in IgG_binding_B →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupImmunoglobulin-binding domains(221.3)

TT-groupImmunoglobulin-binding domains(221.3.1)

FFamilyIgG_binding_B(221.3.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metalwithin 5 Å only

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF01378IgG_binding_B

B domain

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 5HG2 RCSB PDB: 5HG2 PDBe: 5HG2 UniProt: P19909

Downloads

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Drug annotations from DrugDomain.