ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ycbA1 - ECOD Domain | ECOD

ECOD/Domains/e4ycbA1

e4ycbA1

UID: 001764188

PDB

Range: A:21-179
PDB: 4YCB chain A(all domains)
UniProt: A0A063X4U8 (all domains)

Molecule: N5-carboxyaminoimidazole ribonucleotide mutase

3D Structure

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Related Domains

Browse other domains in AIRC →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupN5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)(2007.1.9)

FFamilyAIRC(2007.1.9.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Acetate, Sulfate ion, 1,2-ETHANEDIOL)

AcetateACT
DrugBank DB14511
Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOL

Pfam Families

AIR carboxylase

ClanCL0224DHQS

External Links

ECOD PDB View: 4YCB RCSB PDB: 4YCB PDBe: 4YCB UniProt: A0A063X4U8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.