ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3qujD2 - ECOD Domain | ECOD

ECOD/Domains/e3qujD2

e3qujD2

UID: 001765754

PDB

Range: D:5-87,D:204-266,D:288-312
PDB: 3QUJ chain D(all domains)
UniProt: Q1R3F7 (all domains)
Gene: phnD

Molecule: PhnD, subunit of alkylphosphonate ABC transporter

3D Structure

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Related Domains

Browse other domains in Phosphonate-bd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyPhosphonate-bd(7523.1.1.25)

Ligands

in contact, ≤ 4 Å

Unknown ligandUNL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF12974Phosphonate-bd

ABC transporter, phosphonate, periplasmic substrate-binding protein

ClanCL0177PBP

External Links

ECOD PDB View: 3QUJ RCSB PDB: 3QUJ PDBe: 3QUJ UniProt: Q1R3F7

Downloads

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