ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4e30A1 - ECOD Domain | ECOD

ECOD/Domains/e4e30A1

e4e30A1

UID: 001772403

PDB

Range: A:10-66
PDB: 4E30 chain A(all domains)
UniProt: B5L6K6 (all domains)

Molecule: TcaB9

3D Structure

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Related Domains

Browse other domains in Methyltransf_13 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyMethyltransf_13(375.1.1.41)

Ligands

in contact, ≤ 4 Å

Thymidine-5'- DiphosphateTYD
drugDrugBank DB03103within 5 Å only
Zinc ionZN
metal

+ 1 additive (1,2-ETHANEDIOL)

Pfam Families

PF08421Methyltransf_13

Putative zinc binding domain

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 4E30 RCSB PDB: 4E30 PDBe: 4E30 UniProt: B5L6K6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.