ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1rp7B2 - ECOD Domain | ECOD

ECOD/Domains/e1rp7B2

e1rp7B2

UID: 001772946

PDB

Range: B:56-470
PDB: 1RP7 chain B(all domains)
UniProt: P0AFG8 (all domains)
Gene: aceE

Molecule: Pyruvate dehydrogenase E1 component

3D Structure

Loading viewer...

Related Domains

Browse other domains in Transketolase_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyTransketolase_N(7574.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGENDIPHOSPHATETZD

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00456Transketolase_N

Transketolase, thiamine diphosphate binding domain

ClanCL0254THDP-binding

External Links

ECOD PDB View: 1RP7 RCSB PDB: 1RP7 PDBe: 1RP7 UniProt: P0AFG8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure