ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1rp7B4 - ECOD Domain | ECOD

ECOD/Domains/e1rp7B4

e1rp7B4

UID: 001772947

PDB

Range: B:471-700
PDB: 1RP7 chain B(all domains)
UniProt: P0AFG8 (all domains)
Gene: aceE

Molecule: Pyruvate dehydrogenase E1 component

3D Structure

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Related Domains

Browse other domains in PDH_E1_M →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyPDH_E1_M(7574.1.1.12)

Ligands

in contact, ≤ 4 Å

2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGENDIPHOSPHATETZD

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF17831PDH_E1_M

Pyruvate dehydrogenase E1 component middle domain

ClanCL0254THDP-binding

External Links

ECOD PDB View: 1RP7 RCSB PDB: 1RP7 PDBe: 1RP7 UniProt: P0AFG8

Downloads

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