ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2qgnA1 - ECOD Domain | ECOD

ECOD/Domains/e2qgnA1

e2qgnA1

UID: 001779556

RepresentativePDB

Range: A:2-314
PDB: 2QGN chain A(all domains)
UniProt: Q9KAC3 (all domains)
Gene: miaA

Molecule: tRNA delta(2)-isopentenylpyrophosphate transferase

3D Structure

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Related Domains

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Classification

AArchitecturealpha arrays(a.6)

XX-grouptRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain(3949)

HH-grouptRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain(3949.1)

TT-grouptRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain(3949.1.1)

FFamilyIPPT(3949.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

IPP transferase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 2QGN RCSB PDB: 2QGN PDBe: 2QGN UniProt: Q9KAC3

Downloads

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