ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4yekB3 - ECOD Domain | ECOD

ECOD/Domains/e4yekB3

e4yekB3

UID: 001779830

PDB

Range: B:1-70
PDB: 4YEK chain B(all domains)
UniProt: Q7CP66 (all domains)
Gene: deoA

Molecule: Thymidine phosphorylase

3D Structure

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Related Domains

Browse other domains in Glycos_trans_3N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupNucleoside phosphorylase/phosphoribosyltransferase-N(184)

HH-groupNucleoside phosphorylase/phosphoribosyltransferase-N(184.1)

TT-groupNucleoside phosphorylase/phosphoribosyltransferase-N(184.1.1)

FFamilyGlycos_trans_3N(184.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02885Glycos_trans_3N

Glycosyl transferase family, helical bundle domain

External Links

ECOD PDB View: 4YEK RCSB PDB: 4YEK PDBe: 4YEK UniProt: Q7CP66

Downloads

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