ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ywrA1 - ECOD Domain | ECOD

ECOD/Domains/e4ywrA1

e4ywrA1

UID: 001779882

PDB

Range: A:10-246
PDB: 4YWR chain A(all domains)
UniProt: A0A140UHE5 (all domains)

Molecule: Putative hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase

3D Structure

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Related Domains

Browse other domains in Phos_pyr_kin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRibokinase-like(2003.6)

TT-groupRibokinase-like(2003.6.1)

FFamilyPhos_pyr_kin(2003.6.1.5)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08543Phos_pyr_kin

Phosphomethylpyrimidine kinase

ClanCL0118Ribokinase

External Links

ECOD PDB View: 4YWR RCSB PDB: 4YWR PDBe: 4YWR UniProt: A0A140UHE5

Downloads

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