ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5acfA1 - ECOD Domain | ECOD

ECOD/Domains/e5acfA1

e5acfA1

UID: 001779971

PDB

Range: A:1-235
PDB: 5ACF chain A(all domains)
UniProt: A0A0S2GKZ1 (all domains)
Gene: LPMO9A

Molecule: LYTIC POLYSACCHARIDE MONOOXYGENASE

3D Structure

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Related Domains

Browse other domains in AA9 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyAA9(11.1.1.57)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
Chloride ionCL
COPPER (II) IONCU

Pfam Families

Auxiliary Activity family 9 (formerly GH61)

ClanCL0159E-set

External Links

ECOD PDB View: 5ACF RCSB PDB: 5ACF PDBe: 5ACF UniProt: A0A0S2GKZ1

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.