ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5agtA1 - ECOD Domain | ECOD

ECOD/Domains/e5agtA1

e5agtA1

UID: 001779986

PDB

Range: A:313-513
PDB: 5AGT chain A(all domains)
UniProt: P9WFV1 (all domains)
Gene: leuS

Molecule: LEUCINE--TRNA LIGASE

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1_2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilytRNA-synt_1_2(1.1.1.7)

Ligands

in contact, ≤ 4 Å

4-Chloro-3-aminomethyl-7-[ethoxy]-3H-benzo[C][1,2]oxaborol-1-ol modified adenosineA2H

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13603tRNA-synt_1_2

Leucyl-tRNA synthetase, editing domain

ClanCL0039HUP

External Links

ECOD PDB View: 5AGT RCSB PDB: 5AGT PDBe: 5AGT UniProt: P9WFV1

Downloads

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